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  5. Pp1s93_33V6

Pp1s93_33V6


Description : T4C12.2; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0004286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s93_33V6
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
266894 No alias ABC1 family protein 0.02 Orthogroups_2024-Update
Seita.4G242000.1 No alias ABC1 atypical protein kinase 0.02 Orthogroups_2024-Update
Sobic.010G251300.1 No alias ABC1 atypical protein kinase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001466 Beta-lactam-related 493 920
IPR004147 UbiB_dom 105 210
No external refs found!