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  5. Pp1s96_30V6

Pp1s96_30V6


Description : T9E8.80; leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana]


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s96_30V6
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
412903 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
81544 No alias Leucine-rich repeat (LRR) family protein 0.05 Orthogroups_2024-Update
Bradi1g14050 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Bradi1g55720 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Bradi2g05080 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Brara.H00300.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
GRMZM2G149201 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Glyma.04G035950 No alias Leucine-rich repeat (LRR) family protein 0.06 Orthogroups_2024-Update
Glyma.12G116200 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G096310.2 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
MA_179279g0010 No alias (at3g24480 : 521.0) Leucine-rich repeat (LRR) family... 0.03 Orthogroups_2024-Update
Potri.010G083100 No alias Leucine-rich repeat (LRR) family protein 0.05 Orthogroups_2024-Update
Potri.018G035100 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Seita.1G092900.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Seita.2G050800.1 No alias LRR-domain extensin 0.05 Orthogroups_2024-Update
Seita.3G105100.1 No alias LRR-domain extensin 0.02 Orthogroups_2024-Update
Sobic.009G070500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc06g074150 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Sopen01g051100 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen11g001150 No alias Leucine Rich Repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 63 96
IPR001611 Leu-rich_rpt 136 190
No external refs found!