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  5. Pp1s97_109V6

Pp1s97_109V6


Description : col2 gene for putative CONSTANS-like 2 protein COL2


Gene families : OG_42_0000725 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s97_109V6
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
102790 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
102902 No alias CONSTANS-like 5 0.04 Orthogroups_2024-Update
185898 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
A4A49_03485 No alias zinc finger protein constans-like 4 0.03 Orthogroups_2024-Update
A4A49_38110 No alias zinc finger protein constans-like 2 0.04 Orthogroups_2024-Update
A4A49_38205 No alias zinc finger protein constans-like 5 0.03 Orthogroups_2024-Update
At3g02380 No alias Zinc finger protein CONSTANS-LIKE 2... 0.03 Orthogroups_2024-Update
At5g57660 No alias Zinc finger protein CONSTANS-LIKE 5... 0.04 Orthogroups_2024-Update
Brara.B01196.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Brara.F02700.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Brara.J01176.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Glyma.04G058900 No alias CONSTANS-like 4 0.04 Orthogroups_2024-Update
Glyma.06G059600 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
Glyma.08G255200 No alias CONSTANS-like 2 0.05 Orthogroups_2024-Update
Glyma.13G093800 No alias CONSTANS-like 5 0.06 Orthogroups_2024-Update
Glyma.17G066600 No alias CONSTANS-like 5 0.03 Orthogroups_2024-Update
Glyma.18G278100 No alias CONSTANS-like 2 0.05 Orthogroups_2024-Update
HORVU5Hr1G051230.1 No alias floral promoter *(CONSTANS) 0.03 Orthogroups_2024-Update
Kfl00103_0190 kfl00103_0190_v1.... (at5g24930 : 204.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.02 Orthogroups_2024-Update
LOC_Os02g39710 No alias CCT/B-box zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g42020 No alias CCT/B-box zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g44450 No alias CCT/B-box zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g06464 No alias CCT/B-box zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_7292g0010 No alias (at5g24930 : 245.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.017G107500 No alias CONSTANS-like 2 0.04 Orthogroups_2024-Update
Potri.T016900 No alias CONSTANS-like 2 0.02 Orthogroups_2024-Update
Potri.T094400 No alias CONSTANS-like 5 0.02 Orthogroups_2024-Update
Seita.1G228800.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.04 Orthogroups_2024-Update
Seita.7G153500.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G211200.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G214000.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.04 Orthogroups_2024-Update
Solyc02g089540 No alias CONSTANS 1 0.04 Orthogroups_2024-Update
Sopen02g034260 No alias CCT motif 0.03 Orthogroups_2024-Update
Sopen07g002740 No alias CCT motif 0.05 Orthogroups_2024-Update
Sopen08g002490 No alias CCT motif 0.03 Orthogroups_2024-Update
Sopen12g032330 No alias CCT motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 45 90
IPR010402 CCT_domain 298 340
No external refs found!