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  5. Pp1s98_209V6

Pp1s98_209V6


Description : chloroplast omega-3 fatty acid desaturase


Gene families : OG_42_0001432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s98_209V6
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
103593 No alias fatty acid desaturase 7 0.02 Orthogroups_2024-Update
Bradi1g16580 No alias fatty acid desaturase 8 0.02 Orthogroups_2024-Update
Brara.C03356.1 No alias delta-12/delta-15 fatty acid desaturase 0.02 Orthogroups_2024-Update
Brara.E02955.1 No alias delta-12/delta-15 fatty acid desaturase 0.02 Orthogroups_2024-Update
Cre01.g038600 No alias fatty acid desaturase 7 0.02 Orthogroups_2024-Update
Mp3g17690.1 No alias omega-3/omega-6 fatty acid desaturase 0.02 Orthogroups_2024-Update
Sobic.008G003200.1 No alias delta-12/delta-15 fatty acid desaturase 0.03 Orthogroups_2024-Update
evm.model.tig00021281.40 No alias (p48621|fad3c_soybn : 202.0) Omega-3 fatty acid... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 145 399
IPR021863 FAS_N 83 137
No external refs found!