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  5. Pp1s98_232V6

Pp1s98_232V6


Description : histone h2b


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s98_232V6
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
426757 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
A4A49_61207 No alias putative histone h2b.1 0.03 Orthogroups_2024-Update
A4A49_64528 No alias putative histone h2b.1 0.03 Orthogroups_2024-Update
At3g46030 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178VGU6] 0.03 Orthogroups_2024-Update
Cre06.g264800 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g264900 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g266750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g273850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g274250 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g274750 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g276900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504550 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g505600 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g711750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G065200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G077630.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Mp4g13450.1 No alias histone (H2B) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 49 154
No external refs found!