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  5. Pp1s9_388V6

Pp1s9_388V6


Description : membrane protein


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s9_388V6
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
A4A49_34800 No alias rhomboid-like protein 3 0.02 Orthogroups_2024-Update
Bradi1g77450 No alias RHOMBOID-like 2 0.03 Orthogroups_2024-Update
Bradi3g42100 No alias RHOMBOID-like 2 0.04 Orthogroups_2024-Update
Bradi4g35740 No alias RHOMBOID-like 2 0.02 Orthogroups_2024-Update
Brara.I01408.1 No alias protease *(RBL) 0.04 Orthogroups_2024-Update
GRMZM2G116514 No alias RHOMBOID-like protein 3 0.02 Orthogroups_2024-Update
HORVU3Hr1G012980.6 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
HORVU4Hr1G027850.1 No alias protease *(RBL) 0.01 Orthogroups_2024-Update
HORVU4Hr1G086150.3 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Kfl00353_0040 kfl00353_0040_v1.1 (at2g29050 : 206.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.02 Orthogroups_2024-Update
LOC_Os01g05430 No alias OsRhmbd1 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g35730 No alias OsRhmbd16 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47840 No alias OsRhmbd18 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
PSME_00008986-RA No alias (at2g29050 : 102.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00037775-RA No alias (at2g29050 : 364.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.002G090400 No alias Rhomboid-related intramembrane serine protease family protein 0.02 Orthogroups_2024-Update
Potri.015G142000 No alias RHOMBOID-like protein 3 0.02 Orthogroups_2024-Update
Pp1s509_5V6 No alias F5K20.80; rhomboid family protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G282000.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Sobic.002G270700.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Sopen03g004920 No alias Rhomboid family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 133 274
No external refs found!