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  5. Pp1s9_391V6

Pp1s9_391V6


Description : ntmc2type1.2 gene for putative protein NTMC2Type1.2


Gene families : OG_42_0000345 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s9_391V6
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Kfl00028_0530 kfl00028_0530_v1.1 (at2g20990 : 504.0) Encodes a plasma membrane localized... 0.02 Orthogroups_2024-Update
Kfl00664_0030 kfl00664_0030_v1.1 (at1g05500 : 283.0) Encodes a endomembrane-localized... 0.05 Orthogroups_2024-Update
Mp1g25090.1 No alias endoplasmic reticulum-plasma membrane tethering protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 420 520
IPR000008 C2_dom 261 363
IPR039010 Synaptotagmin_SMP 67 247
No external refs found!