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  5. Solyc12g032980

Solyc12g032980


Description : Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* PSAB_SOLLC)


Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g032980
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Bradi1g39223 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G049190.1 No alias apoprotein PsaB of PS-I complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G049200.2 No alias apoprotein PsaA of PS-I complex 0.05 Orthogroups_2024-Update
Mp1g07160.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Orthogroups_2024-Update
Potri.016G089700 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
Seita.J011100.1 No alias apoprotein PsaA of PS-I complex 0.02 Orthogroups_2024-Update
Seita.J019800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen12g014090 No alias Photosystem I psaA/psaB protein 0.04 Orthogroups_2024-Update
Sopen12g014100 No alias Photosystem I psaA/psaB protein 0.05 Orthogroups_2024-Update
Sopen12g014140 No alias Photosystem I psaA/psaB protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009579 thylakoid IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 2 57
IPR001280 PSI_PsaA/B 65 129
No external refs found!