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  5. Solyc12g033000

Solyc12g033000


Description : Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* PSAB_PINKO)


Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g033000
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
236842 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
PSME_00007865-RA No alias (p41640|psab_pinth : 787.0) Photosystem I P700... 0.03 Orthogroups_2024-Update
PSME_00023812-RA No alias (p58386|psab_wheat : 347.0) Photosystem I P700... 0.03 Orthogroups_2024-Update
Solyc10g052740 No alias LOW QUALITY:Photosystem I P700 chlorophyll a apoprotein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009579 thylakoid IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 1 79
No external refs found!