1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g035450

Solyc12g035450


Description : Terpene cyclase/mutase family member (AHRD V3.3 *-* M1BFG2_SOLTU)


Gene families : OG_42_0000371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g035450
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
At2g07050 No alias Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605] 0.03 Orthogroups_2024-Update
Bradi3g17507 No alias cycloartenol synthase 1 0.01 Orthogroups_2024-Update
GRMZM2G341010 No alias cycloartenol synthase 1 0.02 Orthogroups_2024-Update
HORVU0Hr1G022520.12 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.018G148800 No alias cycloartenol synthase 1 0.03 Orthogroups_2024-Update
Seita.1G091700.1 No alias triterpenoid synthase & EC_5.4 intramolecular... 0.04 Orthogroups_2024-Update
Sobic.004G038300.1 No alias triterpenoid synthase & EC_5.4 intramolecular transferase 0.03 Orthogroups_2024-Update
Solyc05g047580 No alias Terpene cyclase/mutase family member (AHRD V3.3 *** O82141_PANGI) 0.02 Orthogroups_2024-Update
Solyc07g042630 No alias Terpene cyclase/mutase family member (AHRD V3.3 *** V9LYF2_9SOLA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 38 106
No external refs found!