Solyc01g100860

Description : ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN)

Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g100860
Cluster	HCCA clusters: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
At3g03120	No alias	ADP-ribosylation factor B1C [Source:UniProtKB/TrEMBL;Acc:Q9M9N1]	0.03	Orthogroups_2024-Update
Glyma.10G145100	No alias	ADP-ribosylation factor A1F	0.03	Orthogroups_2024-Update
HORVU1Hr1G068790.1	No alias	ARF-GTPase *(ARF1)	0.03	Orthogroups_2024-Update
LOC_Os05g41060	No alias	ADP-ribosylation factor, putative, expressed	0.02	Orthogroups_2024-Update
Seita.5G356400.1	No alias	ARF-GTPase *(ARF1)	0.03	Orthogroups_2024-Update
Sobic.009G178600.1	No alias	ARF-GTPase *(ARF1)	0.03	Orthogroups_2024-Update
Solyc07g006640	No alias	ADP-ribosylation factor family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen01g022790	No alias	ADP-ribosylation factor family	0.04	Orthogroups_2024-Update
evm.model.contig_3588.1	No alias	(at2g24765 : 187.0) GTPase required for Golgi targeting...	0.02	Orthogroups_2024-Update
evm.model.tig00021127.129	No alias	(at3g62290 : 340.0) A member of ARF GTPase family. A...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	7	177

External Links

No external refs found!