Solyc01g100870

Description : ADP-ribosylation factor (AHRD V3.3 *** ARF_VIGUN)

Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g100870
Cluster	HCCA clusters: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23687	No alias	adp-ribosylation factor 2	0.02	Orthogroups_2024-Update
At3g62290	No alias	ADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]	0.03	Orthogroups_2024-Update
Bradi2g53082	No alias	ADP-ribosylation factor A1F	0.04	Orthogroups_2024-Update
Brara.G02969.1	No alias	ARF-GTPase *(ARF1)	0.03	Orthogroups_2024-Update
Glyma.10G145100	No alias	ADP-ribosylation factor A1F	0.03	Orthogroups_2024-Update
HORVU1Hr1G068790.1	No alias	ARF-GTPase *(ARF1)	0.03	Orthogroups_2024-Update
HORVU5Hr1G045440.2	No alias	ARF-GTPase *(ARF1)	0.02	Orthogroups_2024-Update
Seita.5G356400.1	No alias	ARF-GTPase *(ARF1)	0.04	Orthogroups_2024-Update
Sobic.009G178600.1	No alias	ARF-GTPase *(ARF1)	0.02	Orthogroups_2024-Update
Sopen01g022790	No alias	ADP-ribosylation factor family	0.08	Orthogroups_2024-Update
Sopen02g037530	No alias	ADP-ribosylation factor family	0.03	Orthogroups_2024-Update
Sopen06g029180	No alias	ADP-ribosylation factor family	0.03	Orthogroups_2024-Update
evm.model.contig_3588.1	No alias	(at2g24765 : 187.0) GTPase required for Golgi targeting...	0.02	Orthogroups_2024-Update
evm.model.tig00021127.129	No alias	(at3g62290 : 340.0) A member of ARF GTPase family. A...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Predicted GO
MF	GO:0004852	uroporphyrinogen-III synthase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predicted GO
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	7	154

External Links

No external refs found!