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  5. Solyc12g036860

Solyc12g036860


Description : Retrotransposon protein (AHRD V3.3 *** B6THQ7_MAIZE)


Gene families : OG_42_0000665 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g036860
Cluster HCCA clusters: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G018570.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G053050.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen11g025520 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 105 264
No external refs found!