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  5. Solyc12g037980

Solyc12g037980


Description : Actin-related family protein (AHRD V3.3 *** B9I2R4_POPTR)


Gene families : OG_42_0004206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g037980
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
266988 No alias actin-related protein 4 0.03 Orthogroups_2024-Update
Glyma.03G107300 No alias actin-related protein 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 4 434
No external refs found!