1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g008250

Solyc01g008250


Description : Thioredoxin (AHRD V3.3 *-* A0A103XS29_CYNCS)


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g008250
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At1g50320 No alias Thioredoxin X, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi4g02511 No alias thioredoxin M-type 4 0.04 Orthogroups_2024-Update
Brara.C02756.1 No alias thioredoxin *(TRX-M) 0.02 Orthogroups_2024-Update
Cre01.g052250 No alias thioredoxin X 0.03 Orthogroups_2024-Update
GRMZM2G181258 No alias thioredoxin M-type 4 0.02 Orthogroups_2024-Update
HORVU5Hr1G033050.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
HORVU5Hr1G033060.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
Kfl00237_0110 kfl00237_0110_v1.1 (p23400|trxm_chlre : 159.0) Thioredoxin M-type,... 0.02 Orthogroups_2024-Update
Kfl00263_0170 kfl00263_0170_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.005G186800 No alias thioredoxin M-type 4 0.02 Orthogroups_2024-Update
Potri.007G074000 No alias thioredoxin X 0.04 Orthogroups_2024-Update
Pp1s317_45V6 No alias thioredoxin m - 0.02 Orthogroups_2024-Update
Pp1s317_49V6 No alias thioredoxin m - 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 73 173
No external refs found!