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  5. Solyc12g038700

Solyc12g038700


Description : LOW QUALITY:Extensin repeat-containing protein (AHRD V3.3 *-* A0A103YFZ1_CYNCS)


Gene families : OG_42_0006410 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g038700
Cluster HCCA clusters: Cluster_37


Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEA InterProScan predictions
BP GO:0009664 plant-type cell wall organization IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006706 Extensin_dom 50 101
IPR006706 Extensin_dom 77 127
No external refs found!