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  5. Solyc12g040740

Solyc12g040740


Description : Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.1)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g040740
Cluster HCCA clusters: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
A4A49_08665 No alias receptor-like protein 12 0.04 Orthogroups_2024-Update
Bradi2g03920 No alias receptor like protein 23 0.02 Orthogroups_2024-Update
Seita.5G114100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G059300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g012430 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Solyc12g009510 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g009690 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.04 Orthogroups_2024-Update
Solyc12g013680 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Solyc12g099980 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Sopen08g026250 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update
Sopen12g034500 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 89 111
IPR001611 Leu-rich_rpt 194 216
IPR001611 Leu-rich_rpt 150 171
IPR013210 LRR_N_plant-typ 14 33
No external refs found!