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  5. Solyc01g101190

Solyc01g101190


Description : Alpha-humulene/(-)-(E)-beta-caryophyllene synthase (AHRD V1 **** HUMS_ARATH)%3B contains Interpro domain(s) IPR005630 Terpene synthase%2C metal-binding domain


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g101190
Cluster HCCA clusters: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
A4A49_20624 No alias viridiflorene synthase 0.03 Orthogroups_2024-Update
A4A49_23060 No alias germacrene c synthase 0.03 Orthogroups_2024-Update
At1g66020 No alias Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3] 0.02 Orthogroups_2024-Update
GRMZM2G177098 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
LOC_Os04g27790 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.T000400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.6G048800.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.8G192000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.001G173000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Solyc01g105940 No alias Linalool synthase (AHRD V3.3 *-* Q1XBU5_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 222 486
IPR001906 Terpene_synth_N 35 191
No external refs found!