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  5. Solyc12g041890

Solyc12g041890


Description : Non-structural maintenance of chromosome element 4 (AHRD V3.3 *** A0A1D1XPL1_9ARAE)


Gene families : OG_42_0002264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g041890
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g10090 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.003G212600 No alias Nse4, component of Smc5/6 DNA repair complex 0.03 Orthogroups_2024-Update
Potri.T110900 No alias Nse4, component of Smc5/6 DNA repair complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR014854 Nse4_C 205 293
No external refs found!