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  5. Solyc12g042520

Solyc12g042520


Description : Gibberellin-regulated family protein (AHRD V3.3 *** AT2G39540.1)


Gene families : OG_42_0001303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g042520
Cluster HCCA clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
MA_132217g0010 No alias (at5g59845 : 103.0) Gibberellin-regulated family... 0.03 Orthogroups_2024-Update
PSME_00028594-RA No alias (at2g14900 : 80.9) Gibberellin-regulated family protein;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003854 GASA 30 89
No external refs found!