1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g042590

Solyc12g042590


Description : WRKY transcription factor 43


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g042590
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Bradi2g42023 No alias WRKY DNA-binding protein 50 0.02 Orthogroups_2024-Update
Bradi4g19060 No alias WRKY DNA-binding protein 75 0.02 Orthogroups_2024-Update
Bradi4g30360 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
Brara.D00092.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I01929.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G176489 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Glyma.16G219800 No alias WRKY DNA-binding protein 70 0.02 Orthogroups_2024-Update
Glyma.19G217800 No alias WRKY DNA-binding protein 23 0.03 Orthogroups_2024-Update
LOC_Os01g46800 No alias WRKY15, expressed 0.03 Orthogroups_2024-Update
PSME_00036210-RA No alias (at1g62300 : 137.0) Encodes a transcription factor... 0.02 Orthogroups_2024-Update
PSME_00047222-RA No alias (at4g04450 : 178.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00049059-RA No alias (at1g29860 : 114.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
Seita.5G306000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G083000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G077466.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G028600.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Solyc07g051840 No alias WRKY transcription factor 17 0.02 Orthogroups_2024-Update
Solyc09g010960 No alias WRKY transcription factor 49 0.03 Orthogroups_2024-Update
Sopen01g047060 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update
Sopen02g006270 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update
Sopen02g020200 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update
Sopen04g023070 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update
Sopen08g017970 No alias WRKY DNA -binding domain 0.04 Orthogroups_2024-Update
Sopen09g009930 No alias WRKY DNA -binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 136 193
No external refs found!