Solyc12g042830


Description : Small heat-shock protein, putative (AHRD V3.3 *** B9RV59_RICCO)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g042830
Cluster HCCA clusters: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
A4A49_01037 No alias 17.3 kda class ii heat shock protein 0.03 Orthogroups_2024-Update
Brara.D01770.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Cre14.g617400 No alias HSP20-like chaperones superfamily protein 0.01 Orthogroups_2024-Update
HORVU2Hr1G046370.3 No alias class-C-V small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
LOC_Os02g54140 No alias hsp20/alpha crystallin family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.009G147900 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G175200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G130700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G081200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Sobic.003G039400.1 No alias class-C-II small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.003G082100.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.005G086400.1 No alias class-ER small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Solyc03g113930 No alias Heat-shock protein, putative (AHRD V3.3 *** B9S5K5_RICCO) 0.03 Orthogroups_2024-Update
Solyc04g072250 No alias Heat-shock protein, putative (AHRD V3.3 *** B9SMA2_RICCO) 0.03 Orthogroups_2024-Update
Solyc09g059210 No alias Class I heat shock protein (AHRD V3.3 *-* F4YBC5_SOLNI) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 130 230
No external refs found!