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Description : CASC3/barentsz eIF4AIII-binding protein (AHRD V3.3 *** A0A072UG99_MEDTR)
Gene families : OG_42_0002637 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002637_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc12g042990 | |
| Cluster | HCCA clusters: Cluster_208 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.08G207400 | No alias | CASC3/Barentsz eIF4AIII binding | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G013500 | No alias | CASC3/Barentsz eIF4AIII binding | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G068230.1 | No alias | component *(CASC3) of RNA quality control Exon Junction complex | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Predicted GO |
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
| MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | Predicted GO |
| MF | GO:0005402 | carbohydrate:cation symporter activity | IEP | Predicted GO |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
| BP | GO:0006413 | translational initiation | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
| BP | GO:0008643 | carbohydrate transport | IEP | Predicted GO |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015293 | symporter activity | IEP | Predicted GO |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Predicted GO |
| MF | GO:0015295 | solute:proton symporter activity | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018545 | Btz_dom | 115 | 204 |
| No external refs found! |