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  5. Solyc01g102340

Solyc01g102340


Description : R2R3MYB transcription factor 61


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g102340
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Brara.D02243.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Brara.F02448.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G000818 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G104789 No alias myb domain protein 36 0.05 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.13G066600 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.009G061500 No alias myb domain protein 83 0.01 Orthogroups_2024-Update
Potri.012G072500 No alias Duplicated homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Solyc03g116100 No alias R2R3MYB transcription factor 31 0.01 Orthogroups_2024-Update
Sopen02g031450 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_2173.15 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 109
No external refs found!