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  5. Solyc12g056000

Solyc12g056000


Description : Cysteine protease, putative (AHRD V3.3 *** B9SBS8_RICCO)


Gene families : OG_42_0000364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g056000
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g13140 No alias vignain precursor, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008234 cysteine-type peptidase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 38 95
IPR000668 Peptidase_C1A_C 124 339
No external refs found!