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  5. Solyc12g056410

Solyc12g056410


Description : F-box protein PP2-A13 (AHRD V3.3 *** P2A13_ARATH)


Gene families : OG_42_0000800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g056410
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
At1g63090 No alias F-box protein PP2-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN4] 0.02 Orthogroups_2024-Update
Bradi1g77430 No alias phloem protein 2-A13 0.02 Orthogroups_2024-Update
Brara.F00840.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Glyma.03G017000 No alias phloem protein 2-A13 0.03 Orthogroups_2024-Update
Glyma.07G077600 No alias phloem protein 2-A13 0.05 Orthogroups_2024-Update
Potri.001G109800 No alias phloem protein 2-A12 0.03 Orthogroups_2024-Update
Sobic.001G321500.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Solyc10g017960 No alias F-box protein PP2-A13 (AHRD V3.3 *** P2A13_ARATH) 0.02 Orthogroups_2024-Update
Solyc10g085490 No alias F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR) 0.03 Orthogroups_2024-Update
Sopen08g028690 No alias Phloem protein 2 0.04 Orthogroups_2024-Update
Sopen12g029000 No alias Phloem protein 2 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 121 279
No external refs found!