Solyc12g056720

Description : 3-ketoacyl-CoA synthase (AHRD V3.3 *** K4DG03_SOLLC)

Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc12g056720
Cluster	HCCA clusters: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
At1g25450	No alias	3-ketoacyl-CoA synthase 5...	0.03	Orthogroups_2024-Update
Bradi1g36847	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Brara.I00991.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Brara.I04402.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Potri.015G133700	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Seita.3G137500.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Seita.9G263300.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Solyc10g009240	No alias	3-ketoacyl-CoA synthase (AHRD V3.3 *** B9GRP8_POPTR)	0.03	Orthogroups_2024-Update
Sopen08g021340	No alias	FAE1/Type III polyketide synthase-like protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	InterProScan predictions
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	63	356
IPR013747	ACP_syn_III_C	376	459

External Links

No external refs found!

Solyc12g056720

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation