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  5. Solyc12g062610

Solyc12g062610


Description : Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* PSAB_CITSI)


Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g062610
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Potri.009G016300 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
Seita.J011100.1 No alias apoprotein PsaA of PS-I complex 0.02 Orthogroups_2024-Update
Seita.J019800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g017300 No alias Photosystem I P700 chlorophyll a apoprotein A1 (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g036320 No alias LOW QUALITY:Photosystem I P700 chlorophyll a apoprotein... 0.03 Orthogroups_2024-Update
Solyc05g020010 No alias LOW QUALITY:Photosystem I P700 chlorophyll a apoprotein... 0.03 Orthogroups_2024-Update
Solyc12g032960 No alias Photosystem I P700 chlorophyll a apoprotein A1 (AHRD... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009579 thylakoid IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 10 71
IPR001280 PSI_PsaA/B 86 139
No external refs found!