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Description : hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G65660.1)
Gene families : OG_42_0003249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003249_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc12g088140 | |
| Cluster | HCCA clusters: Cluster_159 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_62957 | No alias | uncharacterized protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G203200 | No alias | hydroxyproline-rich glycoprotein family protein | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| BP | GO:0016458 | gene silencing | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
| BP | GO:0032957 | inositol trisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0047325 | inositol tetrakisphosphate 1-kinase activity | IEP | Predicted GO |
| MF | GO:0051765 | inositol tetrakisphosphate kinase activity | IEP | Predicted GO |
| MF | GO:0051766 | inositol trisphosphate kinase activity | IEP | Predicted GO |
| MF | GO:0052725 | inositol-1,3,4-trisphosphate 6-kinase activity | IEP | Predicted GO |
| MF | GO:0052726 | inositol-1,3,4-trisphosphate 5-kinase activity | IEP | Predicted GO |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |