Description : LOW QUALITY:Calcium-binding EF-hand family protein, putative (AHRD V3.3 *** A0A061FAV4_THECC)
Gene families : OG_42_0001197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001197_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc12g088840 | |
Cluster | HCCA clusters: Cluster_117 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g21095 | No alias | calmodulin 9 | 0.02 | Orthogroups_2024-Update | |
LOC_Os09g28500 | No alias | EF hand family protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.002G126900 | No alias | Calcium-binding EF-hand family protein | 0.03 | Orthogroups_2024-Update | |
Solyc12g088850 | No alias | LOW QUALITY:Calcium-binding EF-hand (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Sopen04g032680 | No alias | EF hand | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005509 | calcium ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0004470 | malic enzyme activity | IEP | Predicted GO |
MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0010181 | FMN binding | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016615 | malate dehydrogenase activity | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
MF | GO:0071949 | FAD binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002048 | EF_hand_dom | 15 | 44 |
No external refs found! |