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  5. Solyc12g089070

Solyc12g089070


Description : LOW QUALITY:Ubiquitin family protein (AHRD V3.3 *** B9MXY1_POPTR)


Gene families : OG_42_0010534 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010534_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g089070
Cluster HCCA clusters: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
Solyc04g080070 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 5 78
No external refs found!