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  5. Solyc12g089200

Solyc12g089200


Description : Peptidyl-prolyl cis-trans isomerase-like protein (AHRD V3.3 *** A0A072U025_MEDTR)


Gene families : OG_42_0003340 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g089200
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Bradi2g41160 No alias cyclophilin 59 0.03 Orthogroups_2024-Update
HORVU2Hr1G087160.1 No alias peptidyl-prolyl cis-trans isomerase *(CYP59) & EC_5.2... 0.04 Orthogroups_2024-Update
PSME_00009919-RA No alias (at1g53720 : 132.0) Encodes a cyclophilin, member of a... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA InterProScan predictions
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA InterProScan predictions
BP GO:0006457 protein folding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 130 200
IPR002130 Cyclophilin-type_PPIase_dom 2 64
No external refs found!