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  5. Solyc12g089230

Solyc12g089230


Description : Peptide transporter (AHRD V3.3 *** A0A072V2Y9_MEDTR)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g089230
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_14419 No alias protein nrt1 ptr family 6.2 0.03 Orthogroups_2024-Update
At1g62200 No alias Major facilitator superfamily protein [Source:TAIR;Acc:AT1G62200] 0.03 Orthogroups_2024-Update
At5g19640 No alias Protein NRT1/ PTR FAMILY 7.1... 0.04 Orthogroups_2024-Update
Bradi1g75820 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Bradi2g43917 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Bradi3g39040 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
Brara.H02235.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.I02046.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Brara.I03688.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
GRMZM2G086496 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
GRMZM2G176253 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G139100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G033700 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g04950 No alias peptide transporter PTR2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g37590 No alias peptide transporter PTR2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50950 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g27010 No alias peptide transporter PTR3-A, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g33210 No alias peptide transporter PTR3-A, putative, expressed 0.03 Orthogroups_2024-Update
MA_119405g0010 No alias (at2g02040 : 772.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
MA_927631g0010 No alias (at5g46050 : 227.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
MA_93406g0010 No alias (at2g26690 : 573.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00012572-RA No alias (at3g54140 : 824.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
PSME_00045863-RA No alias (at3g53960 : 513.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Potri.003G088800 No alias nitrate transporter 1.5 0.03 Orthogroups_2024-Update
Potri.009G042400 No alias peptide transporter 1 0.02 Orthogroups_2024-Update
Potri.016G111900 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
Seita.5G396400.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.001G282100.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sopen08g025720 No alias POT family 0.02 Orthogroups_2024-Update
Sopen10g025770 No alias POT family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
InterPro domains Description Start Stop
IPR006634 TLC-dom 34 212
IPR000109 POT_fam 320 733
No external refs found!