Description : LOW QUALITY:Werner Syndrome-like exonuclease (AHRD V3.3 *** W9SHV7_9ROSA)
Gene families : OG_42_0000433 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000433_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc12g094540 | |
Cluster | HCCA clusters: Cluster_123 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.15G138600 | No alias | Polynucleotidyl transferase, ribonuclease H-like... | 0.03 | Orthogroups_2024-Update | |
Sobic.003G245700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEA | InterProScan predictions |
MF | GO:0008408 | 3'-5' exonuclease activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004143 | diacylglycerol kinase activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
CC | GO:0005811 | lipid droplet | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0007049 | cell cycle | IEP | Predicted GO |
BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Predicted GO |
CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030118 | clathrin coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030125 | clathrin vesicle coat | IEP | Predicted GO |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Predicted GO |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
BP | GO:0051321 | meiotic cell cycle | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002562 | 3'-5'_exonuclease_dom | 58 | 199 |
No external refs found! |