Description : RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061FF49_THECC)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc12g094690 | |
Cluster | HCCA clusters: Cluster_106 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_11165 | No alias | ring-h2 finger protein atl8 | 0.03 | Orthogroups_2024-Update | |
A4A49_18667 | No alias | ring-h2 finger protein atl18 | 0.04 | Orthogroups_2024-Update | |
A4A49_27114 | No alias | ring-h2 finger protein atl54 | 0.04 | Orthogroups_2024-Update | |
At1g20823 | No alias | RING-H2 finger protein ATL80... | 0.03 | Orthogroups_2024-Update | |
At4g35480 | No alias | RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] | 0.02 | Orthogroups_2024-Update | |
At5g01880 | No alias | RING-H2 finger protein ATL74... | 0.03 | Orthogroups_2024-Update | |
At5g17600 | No alias | RING-H2 finger protein ATL52... | 0.03 | Orthogroups_2024-Update | |
At5g47610 | No alias | At5g47610 [Source:UniProtKB/TrEMBL;Acc:Q1H5E6] | 0.04 | Orthogroups_2024-Update | |
Brara.A03446.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Brara.A03736.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.E02317.1 | No alias | regulatory ubiquitin-protein ligase *(PRU2) &... | 0.03 | Orthogroups_2024-Update | |
Brara.F00390.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.F01484.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.F03530.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Brara.G01087.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.H00317.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.I02588.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.J02673.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G135011 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.02G194400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G078800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G140700 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G122400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.13G108500 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU0Hr1G016510.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G028370.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G069960.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g64620 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g46100 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g46600 | No alias | RING-H2 finger protein ATL5G, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g52210 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.04 | Orthogroups_2024-Update | |
MA_44828g0020 | No alias | (at3g62690 : 89.0) Encodes a RING-H2 zinc finger protein... | 0.03 | Orthogroups_2024-Update | |
MA_5319g0010 | No alias | (at1g49230 : 120.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.004G209600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.005G071300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.007G111900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.016G067900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.019G091400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.1G178800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.2G087800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.7G095300.1 | No alias | regulatory ubiquitin-protein ligase *(PRU2) &... | 0.02 | Orthogroups_2024-Update | |
Seita.7G321400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.9G336200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.003G344400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.005G036400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.010G071000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.010G157300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Solyc05g055140 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) | 0.03 | Orthogroups_2024-Update | |
Solyc06g049030 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061FT40_THECC) | 0.02 | Orthogroups_2024-Update | |
Solyc12g055710 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G72310.1) | 0.03 | Orthogroups_2024-Update | |
Sopen03g041450 | No alias | Ring finger domain | 0.05 | Orthogroups_2024-Update | |
Sopen12g029870 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen12g031590 | No alias | Ring finger domain | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | Predicted GO |
MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | Predicted GO |
MF | GO:0004784 | superoxide dismutase activity | IEP | Predicted GO |
MF | GO:0005102 | signaling receptor binding | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
BP | GO:0006597 | spermine biosynthetic process | IEP | Predicted GO |
BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
BP | GO:0006812 | cation transport | IEP | Predicted GO |
BP | GO:0006814 | sodium ion transport | IEP | Predicted GO |
MF | GO:0008083 | growth factor activity | IEP | Predicted GO |
BP | GO:0008215 | spermine metabolic process | IEP | Predicted GO |
BP | GO:0008216 | spermidine metabolic process | IEP | Predicted GO |
BP | GO:0008283 | cell proliferation | IEP | Predicted GO |
BP | GO:0008295 | spermidine biosynthetic process | IEP | Predicted GO |
BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
BP | GO:0009725 | response to hormone | IEP | Predicted GO |
BP | GO:0009733 | response to auxin | IEP | Predicted GO |
BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predicted GO |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
MF | GO:0016843 | amine-lyase activity | IEP | Predicted GO |
MF | GO:0016844 | strictosidine synthase activity | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
MF | GO:0030545 | receptor regulator activity | IEP | Predicted GO |
CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
BP | GO:0032957 | inositol trisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0042221 | response to chemical | IEP | Predicted GO |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
MF | GO:0047325 | inositol tetrakisphosphate 1-kinase activity | IEP | Predicted GO |
MF | GO:0048018 | receptor ligand activity | IEP | Predicted GO |
MF | GO:0051765 | inositol tetrakisphosphate kinase activity | IEP | Predicted GO |
MF | GO:0051766 | inositol trisphosphate kinase activity | IEP | Predicted GO |
MF | GO:0052725 | inositol-1,3,4-trisphosphate 6-kinase activity | IEP | Predicted GO |
MF | GO:0052726 | inositol-1,3,4-trisphosphate 5-kinase activity | IEP | Predicted GO |
MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 99 | 142 |
No external refs found! |