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  5. Solyc12g095810

Solyc12g095810


Description : Major facilitator superfamily protein (AHRD V3.3 *** AT1G52190.1)


Gene families : OG_42_0000961 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g095810
Cluster HCCA clusters: Cluster_80


Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 178 610
No external refs found!