Solyc12g096200


Description : R2R3MYB transcription factor 6


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g096200
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.04 Orthogroups_2024-Update
Brara.K00319.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Glyma.04G004100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Glyma.10G236600 No alias myb domain protein 45 0.04 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
HORVU1Hr1G017970.4 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
HORVU2Hr1G120340.2 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G081770.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os12g07640 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_2026g0010 No alias (p20025|myb38_maize : 264.0) Myb-related protein Zm38 -... 0.02 Orthogroups_2024-Update
MA_355131g0010 No alias (at3g28910 : 186.0) transcription factor myb homologue;... 0.02 Orthogroups_2024-Update
MA_37256g0010 No alias (at4g01680 : 233.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00031160-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00035153-RA No alias (at3g02940 : 237.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00044188-RA No alias (at5g35550 : 170.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
PSME_00050866-RA No alias (at1g22640 : 150.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00052620-RA No alias (at3g13540 : 220.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
PSME_00052777-RA No alias (at4g38620 : 269.0) Encodes a R2R3 MYB protein which is... 0.06 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.012G055600 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.015G075800 No alias myb domain protein 66 0.03 Orthogroups_2024-Update
Sobic.007G138800.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.05 Orthogroups_2024-Update
Solyc11g065840 No alias R2R3MYB transcription factor 46 0.06 Orthogroups_2024-Update
Sopen02g016880 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g029710 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!