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  5. Solyc12g096890

Solyc12g096890


Description : F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g096890
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
271662 No alias phloem protein 2-A15 0.02 Orthogroups_2024-Update
At2g02250 No alias Putative F-box protein PP2-B2... 0.03 Orthogroups_2024-Update
At2g02310 No alias Putative F-box protein PP2-B6... 0.03 Orthogroups_2024-Update
At4g19840 No alias Protein PHLOEM PROTEIN 2-LIKE A1... 0.03 Orthogroups_2024-Update
At5g45080 No alias Protein PHLOEM PROTEIN 2-LIKE A6... 0.02 Orthogroups_2024-Update
At5g45090 No alias Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7... 0.04 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00998.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.07G222500 No alias phloem protein 2-A1 0.05 Orthogroups_2024-Update
Glyma.10G150400 No alias phloem protein 2-B15 0.04 Orthogroups_2024-Update
HORVU5Hr1G124090.14 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10434357g0020 No alias (at1g09155 : 177.0) phloem protein 2-B15 (PP2-B15);... 0.04 Orthogroups_2024-Update
MA_6489g0010 No alias (at1g09155 : 168.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
PSME_00005739-RA No alias (at2g02240 : 199.0) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
PSME_00033255-RA No alias (at2g02240 : 94.7) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
PSME_00043920-RA No alias (at1g09155 : 152.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
PSME_00053226-RA No alias (at2g02230 : 145.0) phloem protein 2-B1 (PP2-B1);... 0.03 Orthogroups_2024-Update
Potri.006G267000 No alias F-box family protein 0.02 Orthogroups_2024-Update
Sopen12g033010 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 1 159
No external refs found!