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  5. Solyc12g098190

Solyc12g098190


Description : F-box family protein (AHRD V3.3 *** AT2G02240.1)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g098190
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_26461 No alias f-box protein pp2-b15 0.03 Orthogroups_2024-Update
A4A49_30106 No alias f-box protein 0.02 Orthogroups_2024-Update
At2g02250 No alias Putative F-box protein PP2-B2... 0.03 Orthogroups_2024-Update
At5g24560 No alias phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560] 0.03 Orthogroups_2024-Update
At5g45080 No alias Protein PHLOEM PROTEIN 2-LIKE A6... 0.03 Orthogroups_2024-Update
Bradi1g48286 No alias phloem protein 2-B1 0.02 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.05 Orthogroups_2024-Update
Brara.B03096.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03101.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F00578.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03422.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.F03423.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G03745.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.03G233800 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
Glyma.03G233900 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
Glyma.07G222500 No alias phloem protein 2-A1 0.05 Orthogroups_2024-Update
Glyma.14G073300 No alias phloem protein 2-B10 0.03 Orthogroups_2024-Update
HORVU6Hr1G089430.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10434357g0020 No alias (at1g09155 : 177.0) phloem protein 2-B15 (PP2-B15);... 0.03 Orthogroups_2024-Update
MA_134768g0010 No alias (at1g80110 : 163.0) phloem protein 2-B11 (PP2-B11);... 0.03 Orthogroups_2024-Update
MA_22084g0010 No alias (at2g02240 : 194.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
Mp3g22930.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00043920-RA No alias (at1g09155 : 152.0) phloem protein 2-B15 (PP2-B15);... 0.03 Orthogroups_2024-Update
PSME_00050854-RA No alias (at2g02240 : 154.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
PSME_00051269-RA No alias (at2g02230 : 140.0) phloem protein 2-B1 (PP2-B1);... 0.02 Orthogroups_2024-Update
Potri.013G012600 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
Potri.018G016000 No alias phloem protein 2-B2 0.03 Orthogroups_2024-Update
Pp1s106_35V6 No alias T27I15.150; F-box family protein / lectin-related... 0.04 Orthogroups_2024-Update
Solyc05g053620 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.03 Orthogroups_2024-Update
Solyc11g006740 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.04 Orthogroups_2024-Update
Sopen12g023290 No alias Phloem protein 2 0.03 Orthogroups_2024-Update
Sopen12g033010 No alias Phloem protein 2 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 47
IPR025886 PP2-like 97 260
No external refs found!