1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g098390

Solyc12g098390


Description : Ankyrin repeat-containing protein, putative (AHRD V3.3 *** B9RWH7_RICCO)


Gene families : OG_42_0010197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g098390
Cluster HCCA clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_39559 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 628 739
IPR020683 Ankyrin_rpt-contain_dom 90 172
No external refs found!