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  5. Solyc12g098620

Solyc12g098620


Description : bHLH transcription factor 072


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g098620
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_07602 No alias transcription factor bhlh62 0.03 Orthogroups_2024-Update
A4A49_20906 No alias transcription factor bhlh79 0.03 Orthogroups_2024-Update
At5g62610 No alias Transcription factor bHLH79... 0.03 Orthogroups_2024-Update
Brara.K01309.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
Glyma.02G025400 No alias BIG PETAL P 0.04 Orthogroups_2024-Update
HORVU6Hr1G068980.2 No alias regulatory protein (CIB) of blue light perception &... 0.04 Orthogroups_2024-Update
PSME_00019949-RA No alias (at1g68920 : 206.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
PSME_00034758-RA No alias (at1g68920 : 116.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Sopen01g051890 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 229 276
No external refs found!