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  5. Solyc12g099060

Solyc12g099060


Description : LOW QUALITY:Disease resistance protein (AHRD V3.3 *-* A0A124SEN1_CYNCS)


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g099060
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G035400 No alias NB-ARC domain-containing disease resistance protein 0.06 Orthogroups_2024-Update
Solyc01g088060 No alias Nbs-lrr resistance protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g029160 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen11g029080 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen11g029120 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!