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  5. Solyc12g099740

Solyc12g099740


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein (AHRD V3.3 *** AT5G19420.1)


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc12g099740
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
180358 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Brara.C00879.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G056870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00003947-RA No alias (at5g19420 : 205.0) Regulator of chromosome condensation... 0.02 Orthogroups_2024-Update
PSME_00031453-RA No alias (at5g12350 : 352.0) Regulator of chromosome condensation... 0.03 Orthogroups_2024-Update
Seita.1G275300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g071040 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR001849 PH_domain 23 129
IPR000408 Reg_chr_condens 331 379
IPR000408 Reg_chr_condens 605 652
IPR000408 Reg_chr_condens 382 432
IPR000408 Reg_chr_condens 551 600
IPR000408 Reg_chr_condens 436 484
IPR000408 Reg_chr_condens 499 548
IPR013591 Brevis_radix_dom 1033 1088
IPR000306 Znf_FYVE 656 722
IPR027988 BRX_N 917 951
No external refs found!