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  5. Solyc12g099970

Solyc12g099970


Description : SNF1 kinase complex anchoring protein


Gene families : OG_42_0001630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g099970
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
At5g21170 No alias 5'-AMP-activated protein kinase beta-2 subunit protein... 0.04 Orthogroups_2024-Update
Brara.B00935.1 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.03 Orthogroups_2024-Update
Brara.J01513.1 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.03 Orthogroups_2024-Update
Glyma.02G308800 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.04 Orthogroups_2024-Update
Glyma.14G040700 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.04 Orthogroups_2024-Update
Glyma.15G118600 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G068430.3 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.03 Orthogroups_2024-Update
HORVU4Hr1G052240.1 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 104 185
IPR006828 ASC_dom 218 286
No external refs found!