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  5. Solyc12g100030

Solyc12g100030


Description : LOW QUALITY:Leucine-rich-repeat receptor-like protein (AHRD V3.3 *** A0A097BR55_GOSBA)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g100030
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
A4A49_08665 No alias receptor-like protein 12 0.05 Orthogroups_2024-Update
Bradi2g03856 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
GRMZM2G174128 No alias receptor like protein 7 0.04 Orthogroups_2024-Update
Glyma.13G227800 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
Glyma.14G043100 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Glyma.14G044400 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
LOC_Os01g06730 No alias verticillium wilt disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g06790 No alias disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g10930 No alias NL0E, putative, expressed 0.03 Orthogroups_2024-Update
Potri.011G054500 No alias receptor like protein 6 0.04 Orthogroups_2024-Update
Potri.011G055200 No alias receptor like protein 53 0.03 Orthogroups_2024-Update
Potri.012G005700 No alias receptor like protein 27 0.04 Orthogroups_2024-Update
Potri.012G007800 No alias receptor like protein 35 0.03 Orthogroups_2024-Update
Potri.012G009200 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
Potri.012G009566 No alias receptor like protein 34 0.03 Orthogroups_2024-Update
Potri.012G025400 No alias receptor like protein 19 0.03 Orthogroups_2024-Update
Potri.T163500 No alias receptor like protein 12 0.03 Orthogroups_2024-Update
Seita.5G113800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G199300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G059100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G075700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc06g008270 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g077740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g006020 No alias No description available 0.02 Orthogroups_2024-Update
Solyc12g009690 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Sopen01g008060 No alias Leucine Rich Repeat 0.07 Orthogroups_2024-Update
Sopen06g014090 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update
Sopen12g001990 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update
Sopen12g004670 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 563 623
IPR001611 Leu-rich_rpt 281 340
IPR001611 Leu-rich_rpt 729 786
IPR013210 LRR_N_plant-typ 28 75
No external refs found!