Solyc12g100180

Description : Pleiotropic drug resistance ABC transporter (AHRD V3.3 *** W0TUG3_ACAMN)

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc12g100180
Cluster	HCCA clusters: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
101338	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
235359	No alias	pleiotropic drug resistance 6	0.02	Orthogroups_2024-Update
412710	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
417263	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
417266	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
426328	No alias	pleiotropic drug resistance 6	0.03	Orthogroups_2024-Update
441717	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
441722	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
A4A49_09054	No alias	pleiotropic drug resistance protein 1	0.02	Orthogroups_2024-Update
A4A49_24419	No alias	pleiotropic drug resistance protein 3	0.03	Orthogroups_2024-Update
At1g15210	No alias	PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]	0.03	Orthogroups_2024-Update
Bradi4g28270	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Brara.F01068.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
GRMZM2G143139	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.03G192700	No alias	pleiotropic drug resistance 11	0.04	Orthogroups_2024-Update
Glyma.06G071800	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.10G203000	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
Glyma.13G361900	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.17G039300	No alias	pleiotropic drug resistance 9	0.02	Orthogroups_2024-Update
Glyma.17G206300	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
HORVU4Hr1G081040.4	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
HORVU7Hr1G088630.12	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Kfl00010_0550	kfl00010_0550_v1.1	(q76cu2\|pdr1_tobac : 717.0) Pleiotropic drug resistance...	0.01	Orthogroups_2024-Update
LOC_Os02g21340	No alias	ABC-2 type transporter family protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g43120	No alias	Plant PDR ABC transporter associated domain containing...	0.03	Orthogroups_2024-Update
MA_10427561g0010	No alias	(q8gu88\|pdr7_orysa : 1276.0) Putative pleiotropic drug...	0.03	Orthogroups_2024-Update
MA_12965g0010	No alias	(q949g3\|pdr1_nicpl : 544.0) Pleiotropic drug resistance...	0.04	Orthogroups_2024-Update
MA_249533g0010	No alias	(at2g29940 : 311.0) pleiotropic drug resistance 3...	0.04	Orthogroups_2024-Update
PSME_00000867-RA	No alias	(q8gu92\|pdr2_orysa : 1758.0) Probable pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00001268-RA	No alias	(at1g59870 : 1834.0) ATP binding cassette transporter....	0.02	Orthogroups_2024-Update
PSME_00007105-RA	No alias	(q5z9s8\|pdr12_orysa : 1898.0) Pleiotropic drug...	0.04	Orthogroups_2024-Update
PSME_00007342-RA	No alias	(q5z9s8\|pdr12_orysa : 477.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
PSME_00009473-RA	No alias	(at2g26910 : 1773.0) pleiotropic drug resistance 4...	0.02	Orthogroups_2024-Update
PSME_00010410-RA	No alias	(q8gu88\|pdr7_orysa : 1693.0) Putative pleiotropic drug...	0.06	Orthogroups_2024-Update
PSME_00013320-RA	No alias	(q8gu88\|pdr7_orysa : 1886.0) Putative pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00013643-RA	No alias	(q76cu2\|pdr1_tobac : 1408.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
PSME_00014724-RA	No alias	(q76cu2\|pdr1_tobac : 1860.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
PSME_00015395-RA	No alias	(q76cu2\|pdr1_tobac : 1904.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
PSME_00019551-RA	No alias	(q76cu2\|pdr1_tobac : 1217.0) Pleiotropic drug resistance...	0.05	Orthogroups_2024-Update
Potri.003G179000	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Potri.010G153600	No alias	pleiotropic drug resistance 9	0.03	Orthogroups_2024-Update
Potri.018G074500	No alias	pleiotropic drug resistance 4	0.03	Orthogroups_2024-Update
Pp1s15_135V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Pp1s170_10V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Seita.1G041000.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.4G181500.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.004G254100.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Solyc09g091670	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.06	Orthogroups_2024-Update
Sopen12g034810	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Predicted GO
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Predicted GO
MF	GO:0004620	phospholipase activity	IEP	Predicted GO
MF	GO:0004629	phospholipase C activity	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0008146	sulfotransferase activity	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
BP	GO:0009607	response to biotic stimulus	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016289	CoA hydrolase activity	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	1162	1376
IPR013525	ABC_2_trans	520	732
IPR013581	PDR_assoc	737	800
IPR029481	ABC_trans_N	91	159
IPR003439	ABC_transporter-like	865	1017
IPR003439	ABC_transporter-like	184	366

External Links

No external refs found!

Solyc12g100180

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation