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  5. Solyc12g100190

Solyc12g100190


Description : Pleiotropic drug resistance ABC transporter (AHRD V3.3 *** W0TUG3_ACAMN)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g100190
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
415867 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
At1g15210 No alias PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4] 0.03 Orthogroups_2024-Update
Bradi1g78752 No alias pleiotropic drug resistance 5 0.02 Orthogroups_2024-Update
Bradi2g04847 No alias pleiotropic drug resistance 4 0.03 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Bradi4g28270 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Brara.F01068.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Cre07.g313250 No alias pleiotropic drug resistance 6 0.01 Orthogroups_2024-Update
Cre16.g655450 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.10G203000 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.13G355000 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.05 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Kfl00175_0190 kfl00175_0190_v1.1 (at2g29940 : 809.0) pleiotropic drug resistance 3... 0.02 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g42410 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g32820 No alias pleiotropic drug resistance protein 3, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.03 Orthogroups_2024-Update
MA_173274g0010 No alias (q5z9s8|pdr12_orysa : 429.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_249533g0010 No alias (at2g29940 : 311.0) pleiotropic drug resistance 3... 0.03 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00001267-RA No alias (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug... 0.06 Orthogroups_2024-Update
PSME_00002220-RA No alias (q5z9s8|pdr12_orysa : 1203.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.03 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00019551-RA No alias (q76cu2|pdr1_tobac : 1217.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
Potri.018G074500 No alias pleiotropic drug resistance 4 0.02 Orthogroups_2024-Update
Pp1s15_135V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.1G041000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen08g021560 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen11g003170 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen12g034810 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen12g034820 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 96 153
IPR013525 ABC_2_trans 1156 1369
IPR013525 ABC_2_trans 513 725
IPR003439 ABC_transporter-like 860 1010
IPR003439 ABC_transporter-like 178 360
IPR013581 PDR_assoc 730 793
No external refs found!