Sopen00g003420

Description : Leucine rich repeat

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen00g003420
Cluster	HCCA clusters: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
A4A49_32116	No alias	lrr receptor-like serinethreonine-protein kinase fls2	0.02	Orthogroups_2024-Update
Bradi3g01783	No alias	EF-TU receptor	0.02	Orthogroups_2024-Update
Bradi4g12990	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Bradi4g16068	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
GRMZM2G015406	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
HORVU7Hr1G030920.2	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
LOC_Os02g40130	No alias	leucine-rich, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g25540	No alias	receptor-like protein kinase 2 precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g07170	No alias	receptor kinase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g07225	No alias	expressed protein	0.03	Orthogroups_2024-Update
Mp7g19460.1	No alias	Probable leucine-rich repeat receptor-like protein...	0.02	Orthogroups_2024-Update
PSME_00031091-RA	No alias	(at5g46330 : 205.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00047382-RA	No alias	(at2g24130 : 593.0) Leucine-rich receptor-like protein...	0.02	Orthogroups_2024-Update
PSME_00048631-RA	No alias	(at5g46330 : 300.0) Encodes a leucine-rich repeat...	0.02	Orthogroups_2024-Update
PSME_00054774-RA	No alias	(at3g47110 : 661.0) Leucine-rich repeat protein kinase...	0.02	Orthogroups_2024-Update
Potri.018G020000	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Seita.1G232700.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.1G233400.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.1G246000.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.2G209400.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Seita.5G105200.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Seita.8G157000.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Seita.8G175500.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.003G265900.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sobic.004G091300.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.004G214900.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Sobic.004G288200.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.010G067400.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Solyc02g072480	No alias	LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR)	0.03	Orthogroups_2024-Update
Solyc04g009640	No alias	Non-specific serine/threonine protein kinase (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc04g012100	No alias	Leucine-rich receptor-like protein kinase family protein...	0.04	Orthogroups_2024-Update
Solyc04g014200	No alias	LOW QUALITY:Non-specific serine/threonine protein kinase...	0.04	Orthogroups_2024-Update
Solyc06g006030	No alias	Receptor-like kinase (AHRD V3.3 - A0A072TRW0_MEDTR)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013210	LRR_N_plant-typ	27	66
IPR001611	Leu-rich_rpt	458	518
IPR001611	Leu-rich_rpt	265	323
IPR001611	Leu-rich_rpt	191	251
IPR001611	Leu-rich_rpt	578	638
IPR000719	Prot_kinase_dom	769	1035

External Links

No external refs found!

Sopen00g003420

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation