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  5. Sopen00g003710

Sopen00g003710


Description : Tubulin/FtsZ family, GTPase domain


Gene families : OG_42_0000484 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen00g003710
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
230143 No alias tubulin alpha-4 chain 0.02 Orthogroups_2024-Update
233518 No alias tubulin alpha-4 chain 0.02 Orthogroups_2024-Update
236391 No alias tubulin alpha-2 chain 0.01 Orthogroups_2024-Update
A4A49_65840 No alias tubulin alpha chain 0.05 Orthogroups_2024-Update
At1g04820 No alias Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:B9DGT7] 0.02 Orthogroups_2024-Update
Bradi1g23770 No alias tubulin alpha-5 0.02 Orthogroups_2024-Update
Brara.B00841.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Brara.F00331.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.J01613.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Cre04.g216850 No alias tubulin alpha-2 chain 0.01 Orthogroups_2024-Update
GRMZM2G051782 No alias tubulin alpha-5 0.03 Orthogroups_2024-Update
GRMZM2G152466 No alias Tubulin/FtsZ family protein 0.03 Orthogroups_2024-Update
Glyma.04G088500 No alias tubulin alpha-2 chain 0.02 Orthogroups_2024-Update
Glyma.05G157300 No alias tubulin alpha-5 0.02 Orthogroups_2024-Update
Glyma.08G115100 No alias tubulin alpha-5 0.05 Orthogroups_2024-Update
Glyma.10G255500 No alias tubulin alpha-2 chain 0.03 Orthogroups_2024-Update
Glyma.16G040100 No alias tubulin alpha-5 0.03 Orthogroups_2024-Update
Glyma.19G113000 No alias tubulin alpha-3 0.03 Orthogroups_2024-Update
MA_93486g0010 No alias (at5g19780 : 800.0) Encodes an isoform of alpha tubulin.... 0.02 Orthogroups_2024-Update
Mp1g24530.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Mp4g00550.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Potri.003G220300 No alias tubulin alpha-3 0.03 Orthogroups_2024-Update
Seita.9G110400.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Sobic.001G073700.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Sobic.002G350400.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 228 357
IPR003008 Tubulin_FtsZ_GTPase 12 178
No external refs found!