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  5. Sopen00g005150

Sopen00g005150


Description : Lipoxygenase


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen00g005150
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
170977 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
178158 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
Brara.B01730.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.G02567.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
GRMZM2G109056 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
Glyma.10G153900 No alias lipoxygenase 1 0.04 Orthogroups_2024-Update
Mp8g08690.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
PSME_00029376-RA No alias (at1g72520 : 1009.0) PLAT/LH2 domain-containing... 0.02 Orthogroups_2024-Update
Solyc09g075870 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV70_SOLCH) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013819 LipOase_C 143 817
IPR001024 PLAT/LH2_dom 40 130
No external refs found!